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Yi Hong

Shanghai Jiao Tong University

Journals

  1. Volumetric Medical Image Segmentation via Scribble Annotations and Shape Priors
    Qiuhui Chen, Haiying Lyu, Xinyue Hu, Yong Lu, and Y. Hong
    Machine Vision and Application (MVA), 2025.
  2. R2Net: Efficient and Flexible Diffeomorphic Image Registration Using Lipschitz Continuous Residual Networks
    Ankita Joshi and Y. Hong
    Medical Image Analysis (MedIA), 2023.
  3. ASC-Net: Unsupervised Medical Anomaly Segmentation Using an Adversarial-based Selective Cutting Network
    Raunak Dey, Wenbo Sun, Haibo Xu, and Y. Hong
    arXiv:2112.09135, 2021.
  4. Genetic Load Determines Atrophy in Hand Cortico-Striatal Pathways in Presymptomatic Huntington’s Disease
    Y. Hong, L.J. O'Donnell, P. Savadjiev, F. Zhang, D. Wassermann, O. Pasternak, H. Johnson, J. Paulsen, J.P. Vonsattel, N. Makris, C.F. Westin, and Y. Rathi
    Human Brain Mapping, 2018.
  5. Parametric Regression on the Grassmannian
    Y. Hong, R. Kwitt, N. Singh, N. Vasconcelos, and M. Niethammer
    IEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI), 2016.
  6. Quantitative Assessment of the Upper Airway in Infants and Children with Subglottic Stenosis
    C.J. Zdanski, S.D. Davis, Y. Hong, D. Miao, C. Quammen, S. Mitran, B. Davis, M. Niethammer, J.S. Kimbell, E. Pitkin, J. Fine, L. Fordham, B. Vaughn, and R. Superfine
    The Laryngoscope, 2016.
  7. Shape Analysis Based on Depth-Ordering
    Y. Hong, Y. Gao, M. Niethammer, and S. Bouix
    Medical Image Analysis (MedIA), 2015.
  8. Statistical Atlas Construction via Weighted Functional Boxplot
    Y. Hong, B. Davis, J.S. Marron, R. Kwitt, J. Kimbel, E. Pitkin, R. Superfine, S. Davis, C. Zdanski, and M. Niethammer
    Medical Imaging Analysis (MedIA), 2014.
  9. Geometry-Based Control of Fire Simulation
    Y. Hong, D. Zhu, X. Qiu, and Z. Wang
    The Visual Computer (TVC), 2010.
  10. Generation of Fire Animation Based on Level-Set
    Y. Hong, Z. Wang, D. Zhu, and X. Qiu
    Journal of Computer Research and Development (JCRD, in Chinese), 2010.

Conference Proceedings

  1. Enhancing 3D Medical Image Understanding with 2D Multimodal Large Language Models
    Qiuhui Chen, Xuancheng Yao, Huping Ye, and Y. Hong
    International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2025.
  2. Brain MRI Segmentation with Language-Driven Detection and Context-Aware Descriptions
    Qiang Fu, Xinyuan Xia, and Y. Hong
    International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2025.
  3. Deep Metamorphic Registration for Tumor-Affected Medical Image Alignment
    Wei Jie Pan and Y. Hong
    International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2025.
  4. MedBLIP: Bootstrapping language-image pre-training from 3D medical images and texts
    Qiuhui Chen and Y. Hong
    Asian Conference on Computer Vision (ACCV), 2024.
  5. AliFuse: Aligning and fusing multi-modal medical data for computer-aided diagnosis
    Qiuhui Chen and Y. Hong   [Oral Presentation]
    IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2024.
  6. Enhancing Atlas Construction via Edge-Assisted 3D Latent Diffusion Models for Brain MRI Generation   [Oral Presentation]
    Sheng Xu and Y. Hong
    IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2024.
  7. UP-SAM: Uncertainty-Informed Adaptation of Segment Anything Model for Semi-Supervised Medical Image Segmentation   [Oral Presentation]
    Wenjing Lu, Y. Hong, and Yang Yang
    IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2024.
  8. SMART: Self-weighted multimodal fusion for diagnostics of neurodegenerative disorders
    Qiuhui Chen and Y. Hong
    ACM International Conference on Multimedia (MM), 2024.
  9. NODER: Image Sequence Regression Based on Neural Ordinary Differential Equations
    Hao Bai and Y. Hong   [Oral Presentation]
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2024.
  10. LongFormer: Longitudinal Transformer for Alzheimer’s Disease Classification with Structural MRIs
    Qiuhui Chen, Qiang Fu, Hao Bai, and Y. Hong
    IEEE/CVF Winter Conference on Applications of Computer Vision (WACV), 2024.
  11. Pretrain Once and Finetune Many Times: How Pretraining Benefits Brain MRI Segmentation   [Oral Presentation]
    Hao Zhang, Sheng Xu, Wei Ren, Huping Ye, and Y. Hong
    IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2023.
  12. A2FSeg: Adaptive Multi-Modal Fusion Network for Medical Image Segmentation
    Z. wang and Y. Hong
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2023.
  13. MetaRegNet: Metamorphic Image Registration Using Flow-Driven Residual Networks
    A. Joshi and Y. Hong
    Medical Image Computing and Computer-Assisted Intervention (MICCAI) Workshop on Computational Mathematics Modeling in Cancer Analysis (CMMCA), 2023.
  14. Scribble2D5: Weakly-Supervised Volumetric Image Segmentation via Scribble Annotations
    Q. Chen and Y. Hong
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2022.
  15. Diffeomorphic Image Registration using Lipschitz Continuous Residual Networks
    A. Joshi and Y. Hong
    Medical Imaging with Deep Learning (MIDL), 2022.
  16. Efficient Diffeomorphic Image Registration Using Multi-Scale Dual-Phased Learning
    A. Joshi and Y. Hong
    IEEE International Symposium on Biomedical Imaging (ISBI), 2022.
  17. ASC-Net: Adversarial-based Selective Network for Unsupervised Anomaly Segmentation
    R. Dey and Y. Hong
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2021.
  18. MDA-Net: Multi-Dimensional Attention-Based Neural Network for 3D Image Segmentation   [Oral Presentation]
    R. Gandhi and Y. Hong
    IEEE International Symposium on Biomedical Imaging (ISBI), 2021.
  19. Hybrid Cascaded Neural Network for Liver Lesion Segmentation
    R. Dey and Y. Hong
    IEEE International Symposium on Biomedical Imaging (ISBI), 2020.
  20. SA-Net: Robust State-Action Recognition for Learning from Observations
    N. Soans, Y. Hong, P. Doshi, E. Asali
    International Conference on Robotics and Automation (ICRA), 2020.
  21. CompNet: Complementary Segmentation Network for Brain MRI Extraction   [Spotlight]
    R. Dey and Y. Hong
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2018.
  22. Predictive Image Regression for Longitudinal Studies with Missing Data
    S. Pathan and Y. Hong
    Medical Imaging with Deep Learning (MIDL), 2018.
  23. Diagnostic Classification of Lung Nodules Using 3D Neural Networks
    R. Dey, Z. Lu, and Y. Hong
    IEEE International Symposium on Biomedical Imaging (ISBI), 2018.
  24. Fast Geodesic Regression for Population-Based Image Analysis   [Oral Presentation]
    Y. Hong, P. Golland, and M. Zhang
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2017.
  25. Regression Uncertainty on the Grassmannian   [Oral Presentation]
    Y. Hong, X. Yang, R. Kwitt, M. Styner, and M. Niethammer
    International Conference on Artificial Intelligence and Statistics (AISTATS), 2017.
  26. Model Criticism for Regression on the Grassmannian
    Y. Hong, R. Kwitt, and M. Niethammer
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2015.
  27. Group Testing for Longitudinal Data   [Oral Presentation with Open-Ended Discussion]
    Y. Hong, N. Singh, R. Kwitt, and M. Niethammer
    International Conference on Information Processing in Medical Imaging (IPMI), 2015.
  28. Depth-Based Shape Analysis   [Oral Presentation, Winner of the MICCAI Young Scientist Award]
    Y. Hong, Y. Gao, M. Niethammer, and S. Bouix
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2014.
  29. Time-Warped Geodesic Regression
    Y. Hong, N. Singh, R. Kwitt, and M. Niethammer
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2014.
  30. Geodesic Regression on the Grassmannian
    Y. Hong, R. Kwitt, N. Singh, N. Vasconcelos, and M. Niethammer
    European Conferences on Computer Vision (ECCV), 2014.
  31. Weighted Functional Boxplot with Application to Statistical Atlas Construction
    Y. Hong, B. Davis, J.S. Marron, R. Kwitt and M. Niethammer.
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2013.
  32. A Pediatric Airway Atlas and Its Application in Subglottic Stenosis   [Oral Presentation]
    Y. Hong, M. Niethammer, J. Andruejol, J. Kimbel, E. Pitkin, R. Superfine, S. Davis, C. Zdanski, and B. Davis
    International Symposium on Biomedical Imaging: from Nano to Macro (ISBI), 2013.
  33. Metamorphic Geodesic Regression
    Y. Hong, S. Joshi, M. Sanchez, M. Styner, and M. Niethammer
    Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2012.
  34. Simple Geodesic Regression for Image Time-Series   [Oral Presentation]
    Y. Hong, Y. Shi, M. Styner, M. Sanchez, and M. Niethammer
    5th International Workshop on Biomedical Image Registration (WBIR), 2012.